API

Model

model.SCCORAL(adata[, n_latent, alpha_l1, ...])

Single-cell COvariate-informed Regularized variational Autoencoder with Linear Decoder

Module

module.MODULE(n_input, categorical_mapping, ...)

scCoral model

Training plan

train.ScCoralTrainingPlan(module[, ...])

Implement custom pretraining procedure for sccoral

Datasets

data.splatter_simulation([save_path, filename])

Load simulated count data